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Package: rBAPS
Title: Bayesian Analysis of Population Structure
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Version: 0.0.0.9030
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Date: 2020-11-09
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Authors@R:
c(
person(
given = "Waldir",
family = "Leoncio",
role = c("aut", "cre"),
email = "w.l.netto@medisin.uio.no"
),
person(
given = "Jukka",
family = "Corander",
role = c("aut"),
email = "jukka.corander@medisin.uio.no"
),
person(
given = "Gerry",
family = "Tonkin-Hill",
role = c("aut"),
email = "jukka.corander@medisin.uio.no"
)
)
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Description: Partial R implementation of the BAPS software
(Corander and Marttinen 2006 <doi:10.1111/j.1365-294X.2006.02994.x>;
Corander and Tang 2007 <doi:10.1016/j.mbs.2006.09.015>;
Corander et al. 2008a <doi:10.1186/1471-2105-9-539>;
Corander et al. 2008b <doi:10.1007/s00180-007-0072-x>;
Tang et al. 2009 <doi:10.1371/journal.pcbi.1000455>;
Cheng et al. 2011 <doi:10.1186/1471-2105-12-302>,
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available at <http://www.helsinki.fi/bsg/software/BAPS/Z>), provides a
computationally-efficient method for the identification of admixture events
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in genetic population history.
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License: GPL-3
BugReports: https://github.com/ocbe-uio/rBAPS/issues
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Encoding: UTF-8
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RoxygenNote: 7.3.2
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Suggests:
testthat (>= 2.1.0)
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Imports:
methods, ape, vcfR, Rsamtools, adegenet, matlab2r, R6, zeallot