diff --git a/R/computePopulationLogml.R b/R/computePopulationLogml.R new file mode 100644 index 0000000..bf9782d --- /dev/null +++ b/R/computePopulationLogml.R @@ -0,0 +1,24 @@ +computePopulationLogml <- function(pops, adjprior, priorTerm) { + # Palauttaa length(pops)*1 taulukon, jossa on laskettu korikohtaiset + + x <- size(COUNTS, 1) + y <- size(COUNTS, 2) + z <- length(pops) + + popLogml <- squeeze( + sum( + sum( + reshape( + lgamma( + repmat(adjprior, c(1, 1, length(pops))) + + COUNTS[, , pops] + ), + c(x, y, z) + ), + 1 + ), + 2 + ) + ) - sum(lgamma(1 + SUMCOUNTS[pops, ]), 2) - priorTerm + return(popLogml) +} \ No newline at end of file