diff --git a/tests/testthat/test-greedyMix.R b/tests/testthat/test-greedyMix.R index 1283e71..ff83883 100644 --- a/tests/testthat/test-greedyMix.R +++ b/tests/testthat/test-greedyMix.R @@ -57,13 +57,6 @@ test_that("Files are imported correctly", { ) ) expect_equal(length(raw_bam[[1]]), 13) - expect_error( - greedyMix( - data = file.path(path_inst, "FASTA_clustering_haploid.fasta"), - format = "FASTA" - ), - "FASTA format not yet supported on greedyMix" - ) }) test_that("greedyMix() fails successfully", { @@ -73,9 +66,13 @@ test_that("greedyMix() fails successfully", { test_that("greedyMix() works when it should", { baps_file <- file.path(path_inst, "BAPS_clustering_diploid.txt") + fasta_file <- file.path(path_inst, "FASTA_clustering_haploid.fasta") greedy_baps <- greedyMix(baps_file, "BAPS") + greedy_fasta <- greedyMix(fasta_file, "FASTA") expect_type(greedy_baps, "list") expect_length(greedy_baps, 10L) + expect_type(greedy_fasta, "list") + expect_length(greedy_fasta, 10L) }) context("Linkage")