From c88c282d5c90bb82d7fffa77436cdd2c4f681b01 Mon Sep 17 00:00:00 2001 From: Waldir Leoncio Date: Wed, 17 Aug 2022 11:33:15 +0200 Subject: [PATCH] Split release and devel BiocManager installation --- .github/workflows/build.yml | 10 +++++++++- 1 file changed, 9 insertions(+), 1 deletion(-) diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml index f0d9722..ffb00e0 100644 --- a/.github/workflows/build.yml +++ b/.github/workflows/build.yml @@ -72,13 +72,21 @@ jobs: done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') # Installing package dependencies ------------------------ # - - name: Installing package dependencies + - name: Installing package dependencies (release) + if: ${{ matrix.config.r == 'release' }} run: | remotes::install_cran(c("rcmdcheck", "BiocManager")) BiocManager::install("GenomicRanges") BiocManager::install("Rsamtools") remotes::install_deps(dependencies = TRUE) shell: Rscript {0} + - name: Installing package dependencies (devel) + if: ${{ matrix.config.r == 'devel' }} + run: | + remotes::install_cran(c("rcmdcheck", "BiocManager")) + remotes::install_deps(dependencies = TRUE) + BiocManager::install(version = "devel") + shell: Rscript {0} # Checking package --------------------------------------- # - name: Checking package