diff --git a/.github/workflows/r.yml b/.github/workflows/r.yml index 3f112ec..3f3ea2c 100644 --- a/.github/workflows/r.yml +++ b/.github/workflows/r.yml @@ -10,12 +10,7 @@ # Determines when the action is triggered # # ======================================================== # -on: - push: - branches: [ develop ] - pull_request: - branches: [ develop ] - +on: [push, pull_request] name: R-CMD-check # ======================================================== # @@ -70,6 +65,7 @@ jobs: - name: Installing system dependencies if: runner.os == 'Linux' run: | + sudo apt-get install libcurl4-openssl-dev while read -r cmd do eval sudo $cmd @@ -79,6 +75,7 @@ jobs: - name: Installing package dependencies run: | remotes::install_cran(c("rcmdcheck", "BiocManager")) + BiocManager::install("GenomicRanges") BiocManager::install("Rsamtools") remotes::install_deps(dependencies = TRUE) shell: Rscript {0}