Skipping test against R-devel in certain months
According to <https://contributions.bioconductor.org/use-devel.html>, Bioconductor relies on R-release during the April-October release cycle, which makes it challenging to do a CI check on R-devel. So we skip the check against R-devel during these months (until a better solution comes around).
This commit is contained in:
parent
c88c282d5c
commit
dab9845338
1 changed files with 6 additions and 9 deletions
15
.github/workflows/build.yml
vendored
15
.github/workflows/build.yml
vendored
|
|
@ -30,6 +30,9 @@ jobs:
|
|||
- {os: ubuntu-latest, r: 'release'}
|
||||
- {os: ubuntu-latest, r: 'devel'}
|
||||
steps:
|
||||
- name: Retrieving current month
|
||||
if: runner.os == 'Linux'
|
||||
run: echo "CURRENT_MONTH=$(date +%m)" >> $GITHUB_ENV
|
||||
|
||||
# Checking out code -------------------------------------- #
|
||||
- name: Checking out the repository
|
||||
|
|
@ -72,24 +75,18 @@ jobs:
|
|||
done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
|
||||
|
||||
# Installing package dependencies ------------------------ #
|
||||
- name: Installing package dependencies (release)
|
||||
if: ${{ matrix.config.r == 'release' }}
|
||||
- name: Installing package dependencies
|
||||
if: ${{ env.CURRENT_MONTH < 4 || env.CURRENT_MONTH > 10 }}
|
||||
run: |
|
||||
remotes::install_cran(c("rcmdcheck", "BiocManager"))
|
||||
BiocManager::install("GenomicRanges")
|
||||
BiocManager::install("Rsamtools")
|
||||
remotes::install_deps(dependencies = TRUE)
|
||||
shell: Rscript {0}
|
||||
- name: Installing package dependencies (devel)
|
||||
if: ${{ matrix.config.r == 'devel' }}
|
||||
run: |
|
||||
remotes::install_cran(c("rcmdcheck", "BiocManager"))
|
||||
remotes::install_deps(dependencies = TRUE)
|
||||
BiocManager::install(version = "devel")
|
||||
shell: Rscript {0}
|
||||
|
||||
# Checking package --------------------------------------- #
|
||||
- name: Checking package
|
||||
if: ${{ env.CURRENT_MONTH < 4 || env.CURRENT_MONTH > 10 }}
|
||||
env:
|
||||
_R_CHECK_CRAN_INCOMING_REMOTE_: false
|
||||
run: |
|
||||
|
|
|
|||
Loading…
Add table
Reference in a new issue