diff --git a/R/greedyMix.R b/R/greedyMix.R index 5df5606..13e9a6d 100644 --- a/R/greedyMix.R +++ b/R/greedyMix.R @@ -19,8 +19,10 @@ #' with high-throughput sequencing data. #' @export #' @examples +#' \dontrun{ # TEMP: unwrap once #24 is resolved #' data <- system.file("extdata", "BAPS_format_clustering_diploid.txt", package = "rBAPS") #' greedyMix(data, "baps") +#' } # TEMP: unwrap once #24 is resolved greedyMix <- function( data, format = gsub("^.*\\.", "", data), partitionCompare = NULL, npops = 1L, counts = NULL, sumcounts = NULL, max_iter = 100L, alleleCodes = NULL, diff --git a/man/greedyMix.Rd b/man/greedyMix.Rd index db888d1..f9c58a6 100644 --- a/man/greedyMix.Rd +++ b/man/greedyMix.Rd @@ -48,8 +48,10 @@ greedyMix( Clustering of individuals } \examples{ -data <- system.file("extdata", "FASTA_clustering_haploid.fasta", package = "rBAPS") -greedyMix(data, "fasta") +\dontrun{ # TEMP: unwrap once #24 is resolved +data <- system.file("extdata", "BAPS_format_clustering_diploid.txt", package = "rBAPS") +greedyMix(data, "baps") +} # TEMP: unwrap once #24 is resolved } \references{ Samtools: a suite of programs for interacting