diff --git a/tests/testthat/test-greedyPopMix.R b/tests/testthat/test-greedyPopMix.R index 5378a70..cfe441c 100644 --- a/tests/testthat/test-greedyPopMix.R +++ b/tests/testthat/test-greedyPopMix.R @@ -1,14 +1,17 @@ context("greedyPopMix functions") test_that("Auxiliary functions work properly", { + # Testing findOutRowsFromInd ------------------------------------------------- x <- matrix(11:16, 3) y <- matrix(2:7, 3) z <- list( popnames2 = matrix(c(11:13, seq(1.5, 2.5, 0.5)), 3), rowsFromInd = 2 ) - x2 <- matrix(seq(4, 14, 2), 3) expect_equal(findOutRowsFromInd(x, y, "Diploid"), z) + + # Testing getPopDistancesByKL ------------------------------------------------ + x2 <- matrix(seq(4, 14, 2), 3) expect_equal( getPopDistancesByKL(x2), list( @@ -16,14 +19,16 @@ test_that("Auxiliary functions work properly", { distances = as.matrix(rep(0, 4950)) ) ) + + # Testing handlePopData ------------------------------------------------------ x3 <- matrix(c(9, 4, 1, 8, 5, 2, 1, 2, 3), 3) y3 <- list( - newData = matrix(c(3:1, 3:1, 1:3), 3), - rows = matrix(c(1:3, 1:3), 3), + newData = matrix(c(3: 1, 3: 1, 1: 3), 3), + rows = matrix(c(1: 3, 1: 3), 3), alleleCodes = matrix(c(1, 4, 9, 2, 5, 8), 3), - noalle = c(3, 3), - adjprior = matrix(rep(3/9, 6), 3), - priorTerm = 5.9125 + noalle = c(3, 3), + adjprior = matrix(rep(3/9, 6), 3), + priorTerm = 5.9125 ) expect_equal(handlePopData(x3), y3) })