tulostaAdmixtureTiedot <- function(proportions, uskottavuus, alaRaja, niter) { # TODO: discover what this function does. Plotting? Get examples? # h0 <- findobj('Tag','filename1_text') # inputf = get(h0,'String'); # h0 = findobj('Tag','filename2_text'); # outf = get(h0,'String'); clear h0; # if length(outf)>0 # fid = fopen(outf,'a'); # else # fid = -1; # diary('baps4_output.baps'); % save in text anyway. # end # ninds = length(uskottavuus); # npops = size(proportions,2); # disp(' '); # dispLine; # disp('RESULTS OF ADMIXTURE ANALYSIS BASED'); # disp('ON MIXTURE CLUSTERING OF INDIVIDUALS'); # disp(['Data file: ' inputf]); # disp(['Number of individuals: ' num2str(ninds)]); # disp(['Results based on ' num2str(niter) ' simulations from posterior allele frequencies.']); # disp(' '); # if fid ~= -1 # fprintf(fid, '\n'); # fprintf(fid,'%s \n', ['--------------------------------------------']); fprintf(fid, '\n'); # fprintf(fid,'%s \n', ['RESULTS OF ADMIXTURE ANALYSIS BASED']); fprintf(fid, '\n'); # fprintf(fid,'%s \n', ['ON MIXTURE CLUSTERING OF INDIVIDUALS']); fprintf(fid, '\n'); # fprintf(fid,'%s \n', ['Data file: ' inputf]); fprintf(fid, '\n'); # fprintf(fid,'%s \n', ['Number of individuals: ' num2str(ninds)]); fprintf(fid, '\n'); # fprintf(fid,'%s \n', ['Results based on ' num2str(niter) ' simulations from posterior allele frequencies.']); fprintf(fid, '\n'); # fprintf(fid, '\n'); # end # ekaRivi = blanks(6); # for pop = 1:npops # ekaRivi = [ekaRivi blanks(3-floor(log10(pop))) num2str(pop) blanks(2)]; # end # ekaRivi = [ekaRivi blanks(1) 'p']; % Added on 29.08.06 # disp(ekaRivi); # for ind = 1:ninds # rivi = [num2str(ind) ':' blanks(4-floor(log10(ind)))]; # if any(proportions(ind,:)>0) # for pop = 1:npops-1 # rivi = [rivi proportion2str(proportions(ind,pop)) blanks(2)]; # end # rivi = [rivi proportion2str(proportions(ind,npops)) ': ']; # rivi = [rivi ownNum2Str(uskottavuus(ind))]; # end # disp(rivi); # if fid ~= -1 # fprintf(fid,'%s \n',[rivi]); fprintf(fid,'\n'); # end # end # if fid ~= -1 # fclose(fid); # else # diary off }