22 lines
698 B
R
22 lines
698 B
R
initialPopCounts <- function(data, npops, rows, noalle, adjprior) {
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# nloci=size(data,2)
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# counts <- zeros(max(noalle),nloci,npops)
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# sumcounts <- zeros(npops,nloci)
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# for (i in 1:npops) {
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# for (j in 1:nloci) {
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# i_rivit <- rows(i,1):rows(i,2)
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# havainnotLokuksessa <- find(data(i_rivit,j)>=0)
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# sumcounts(i,j) <- length(havainnotLokuksessa)
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# for (k in 1:noalle(j)) {
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# alleleCode <- k
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# N_ijk <- length(find(data(i_rivit,j)==alleleCode))
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# counts(k,j,i) <- N_ijk
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# }
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# }
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# }
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# logml <- laskeLoggis(counts, sumcounts, adjprior)
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return(sumcounts = sumcounts, counts = counts, logml = logml)
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}
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