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addAlleles.R
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Refactoring
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2020-11-09 06:26:53 +01:00 |
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addToSummary.R
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Fixed syntax
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2020-10-19 15:58:08 +02:00 |
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admix1.R
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Swapped argument order to match MATLAB
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2021-05-20 09:17:08 +02:00 |
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admixture_initialization.R
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Fixed syntax
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2020-11-19 07:53:36 +01:00 |
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arvoSeuraavaTi.R
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Translated arvoSeuraavaTi
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2020-11-19 13:30:00 +01:00 |
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blanks.R
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Translated basic Matlab function blanks()
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2020-07-13 13:59:35 +02:00 |
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calculatePopLogml.R
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Changed behavior of log(gamma(x))
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2019-12-16 16:36:51 +01:00 |
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cell.R
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Several fixes to code to pass unit tests
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2021-08-23 09:10:10 +02:00 |
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clearGlobalVars.R
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Fixed global variable handling
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2020-11-19 08:09:04 +01:00 |
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cluster_own.R
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Removed duplicated function
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2021-05-20 09:18:33 +02:00 |
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clusternum.R
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Fixed syntax
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2021-05-20 09:18:05 +02:00 |
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colon.R
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Added basic colon function
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2020-01-15 15:18:49 +01:00 |
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computeAllFreqs2.R
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Several fixes to code to pass unit tests
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2021-08-23 09:10:10 +02:00 |
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computeDiffInCounts.R
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Reformatting output
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2021-06-29 10:37:52 +02:00 |
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computeIndLogml.R
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Fixed bugs on old functions
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2020-01-15 13:29:47 +01:00 |
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computeLogml.R
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Translated computeLogml
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2020-11-19 10:46:37 +01:00 |
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computePersonalAllFreqs.R
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Several fixes to code to pass unit tests
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2021-08-23 09:10:10 +02:00 |
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computePopulationLogml.R
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Refactoring
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2021-06-29 10:37:42 +02:00 |
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computeRows.R
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Fixed class-checking bugs
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2020-05-12 06:47:24 +02:00 |
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displine.R
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Added displine
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2019-12-17 16:48:22 +01:00 |
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etsiParas.R
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Finished proper implementation of etsiParas
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2020-01-15 17:05:36 +01:00 |
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fgetl-fopen.R
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Renamed file
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2020-07-31 09:27:18 +02:00 |
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find.R
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Added sorting of output on find()
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2021-03-31 10:27:45 +02:00 |
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findEmptyPop.R
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Translated findEmptyPop
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2020-11-09 08:33:02 +01:00 |
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fix.R
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Translated fix from base MATLAB
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2020-07-14 14:09:57 +02:00 |
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getDistances.R
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Translated getDistances
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2020-11-19 11:51:13 +01:00 |
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globals.R
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Refactoring and syntax fixes
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2021-06-29 10:41:23 +02:00 |
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greedyMix.R
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Closed TODO
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2021-09-03 11:11:55 +02:00 |
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handleData.R
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Syntax fixes
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2021-03-31 10:31:14 +02:00 |
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indMix.R
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Refactoring and syntax fixes
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2021-06-29 10:41:23 +02:00 |
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initialCounts.R
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Fixed function output
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2021-01-15 11:46:11 +01:00 |
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initializeGammaln.R
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Translated initializeGammaln
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2020-11-19 08:44:38 +01:00 |
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initialPopCounts.R
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Fixed syntax
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2020-11-19 07:53:36 +01:00 |
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initPopNames.R
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Translated initPopNames
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2020-07-14 13:37:56 +02:00 |
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inputdlg.R
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Swapped argument order to match MATLAB
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2021-05-20 09:17:08 +02:00 |
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isempty.R
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Fixed class-checking bugs
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2020-05-12 06:47:24 +02:00 |
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isfield.R
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Added vectorizing capability and unit test
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2020-03-03 11:04:40 +01:00 |
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isGlobalEmpty.R
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Minor changes for clean check
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2021-08-23 14:34:20 +02:00 |
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isspace.R
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Added base function isspace()
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2020-07-28 10:31:06 +02:00 |
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kldiv2str.R
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Translated kldiv2str
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2020-07-14 10:10:26 +02:00 |
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laskeLoggis.R
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Fixed syntax
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2020-11-19 07:53:36 +01:00 |
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laskeMuutokset12345.R
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Several fixes to code to pass unit tests
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2021-08-23 09:10:10 +02:00 |
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laskeOsaDist.R
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Fixed syntax
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2020-11-19 07:53:36 +01:00 |
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learn_partition_modified.R
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Exported functions
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2020-12-11 12:32:41 +01:00 |
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learn_simple_partition.R
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Renamed files
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2019-12-16 18:05:35 +01:00 |
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linkage.R
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Fixed linkage()
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2020-07-31 13:59:11 +02:00 |
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load_fasta.R
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Improved load_fasta validation
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2021-09-03 09:09:09 +02:00 |
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log_gamma.R
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Changed behavior of log(gamma(x))
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2019-12-16 16:36:51 +01:00 |
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logml2String.R
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Translated logml2String
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2020-07-13 15:13:36 +02:00 |
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lueGenePopData.R
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Fixed addAlleles and lueGenePopData
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2020-07-28 15:35:04 +02:00 |
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lueNimi.R
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Improved validation
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2020-07-28 15:35:17 +02:00 |
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matlab2r.R
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Improved lots of substutitions
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2020-11-19 13:32:14 +01:00 |
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min_max_MATLAB.R
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Fixed syntax
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2021-02-15 09:49:21 +01:00 |
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nargin.R
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Added nargin function
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2020-10-19 09:50:12 +02:00 |
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newGetDistances.R
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Fixed newGetDistances()
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2020-07-31 13:59:40 +02:00 |
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noIndex.R
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Minor changes for clean build
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2020-03-18 15:02:38 +01:00 |
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omaRound.R
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Translated omaRound()
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2020-07-14 15:16:10 +02:00 |
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ownNum2Str.R
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Added CHANGELOG, improved other docs
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2019-12-16 18:42:50 +01:00 |
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palautaYks.R
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Translated palautaYks
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2020-07-13 15:05:18 +02:00 |
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poistaLiianPienet.R
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Removed global variables from argument lists
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2020-11-19 14:48:33 +01:00 |
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poistaTyhjatPopulaatiot.R
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Fixed global variable handling
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2020-11-19 08:09:04 +01:00 |
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proportion2str.R
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Added proportion2str
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2019-12-17 16:38:55 +01:00 |
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questdlg.R
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Allowing for empty title
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2020-05-20 13:08:57 +02:00 |
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rand.R
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Improved documentation
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2020-01-14 16:37:00 +01:00 |
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rand_disc.R
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Translated rand_disc
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2020-11-19 12:15:16 +01:00 |
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randdir.R
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Added randdir
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2019-12-17 15:52:59 +01:00 |
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randga.R
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Internalized function
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2019-12-17 15:52:29 +01:00 |
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repmat.R
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Improved handling of 0-dim on repmat
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2021-02-15 09:03:44 +01:00 |
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reshape.R
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Added reshape function
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2020-02-25 11:48:12 +01:00 |
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returnInOrder.R
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Fixed syntax error
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2020-11-09 14:30:53 +01:00 |
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rivinSisaltamienMjonojenLkm.R
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Fixed behavior of rivinSisaltamienMjonojenLkm
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2020-07-28 10:44:10 +02:00 |
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selvitaDigitFormat.R
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Fixed behavior of lueNimi and selvitaDigitFormat
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2020-07-28 12:50:54 +02:00 |
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setdiff_MATLAB.R
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Implemented dataframe parsing on setdiff
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2021-01-15 08:59:48 +01:00 |
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simulateAllFreqs.R
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Several fixes to code to pass unit tests
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2021-08-23 09:10:10 +02:00 |
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simulateIndividuals.R
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Fixed documentation for clean build
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2020-03-02 16:15:01 +01:00 |
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simuloiAlleeli.R
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Fixed documentation for clean build
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2020-03-02 16:15:01 +01:00 |
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size.R
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Fixed bugs in size() for non-sequential x
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2020-03-03 14:31:15 +01:00 |
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sortrows.R
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Implemented sortrows from base Matlab
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2020-03-18 11:08:40 +01:00 |
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squeeze.R
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Optimized squeeze()
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2020-07-14 11:18:01 +02:00 |
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strcmp.R
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Fixed scope bug
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2020-03-18 15:02:56 +01:00 |
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suoritaMuutos.R
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Several fixes to code to pass unit tests
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2021-08-23 09:10:10 +02:00 |
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takeLine.R
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Translated takeLine()
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2020-07-13 13:23:31 +02:00 |
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testaaGenePopData.R
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Fixed behavior of testaaGenePopData
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2020-07-28 11:45:28 +02:00 |
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testaaOnkoKunnollinenBapsData.R
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Fixed syntax
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2021-03-30 08:23:21 +02:00 |
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testaaPop.R
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Fixed behavior of testaaPop
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2020-07-28 10:39:07 +02:00 |
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times.R
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Fixed bugs on old functions
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2020-01-15 13:29:47 +01:00 |
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tulostaAdmixtureTiedot.R
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To-do cleanup
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2021-08-23 13:46:48 +02:00 |
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uigetfile.R
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Added listing of files
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2020-05-20 13:09:11 +02:00 |
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uiputfile.R
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Added uiputfile
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2020-05-20 12:15:25 +02:00 |
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updateGlobalVariables.R
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Replaced rowSums with colSums to match MATLAB sum
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2021-02-15 10:15:25 +01:00 |
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viewPartition.R
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Removed global variables from argument lists
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2020-11-19 14:48:33 +01:00 |
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writeMixtureInfo.R
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Translated admixture_initialization
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2020-10-19 13:44:18 +02:00 |
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zeros_ones.R
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Fixed handling of global
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2021-01-15 09:38:47 +01:00 |
