Commit graph

80 commits

Author SHA1 Message Date
Waldir Leoncio
a354202bc0 Added unit tests (#3) 2022-11-16 11:56:30 +01:00
Waldir Leoncio
1667682c5e Refactored laskeMuutokset4() as an R6 method 2022-08-25 12:54:55 +02:00
Waldir Leoncio
835ac7e6b9 Fixed several linting issues 2022-07-28 15:47:36 +02:00
Waldir Leoncio
86a5dda6d6 Translated mysetdiff() (#3) 2022-07-28 14:43:04 +02:00
Waldir Leoncio
84e0eb61d8 Translated computeDiffInCliqCounts() (#3) 2022-07-28 14:23:35 +02:00
Waldir Leoncio
31ab81a215 Translated computeCounts() (#3) 2022-07-28 11:16:59 +02:00
Waldir Leoncio
9b1cf810a3 Fixing test expectation 2022-04-13 09:12:59 +02:00
Waldir Leoncio
f81a078365 Reorganizing tests 2022-04-13 09:12:59 +02:00
Waldir Leoncio
40f2b3f07a Added test unit for handlePopData() 2022-04-13 09:12:59 +02:00
Waldir Leoncio
58ee8ccb92 Added unit test 2022-04-12 14:14:51 +02:00
Waldir Leoncio
c9c310d1fa Translated getPopDistancesByKL (#2) 2022-04-12 14:14:12 +02:00
Waldir Leoncio
98cff11128 Added unit test file for greedyPopMix functions (#2) 2022-02-08 11:23:22 +01:00
Waldir Leoncio
9fb8c08f72 Removed functions moved to matlab2r (#21) 2022-01-27 11:40:16 +01:00
Waldir Leoncio
c5cf0edd1d Removed unnecessary concantenations 2021-11-10 14:55:11 +01:00
Waldir Leoncio
fca9caa731 Restyled files
Ran through styler::style_dir() in the R and tests directories in preparation for #23.
2021-11-10 14:25:50 +01:00
Waldir Leoncio
d105c40d39 Refactoring 2021-09-03 12:50:40 +02:00
Waldir Leoncio
0cfd13b006 Added SAM/BAM support (closes #18) 2021-09-03 12:50:28 +02:00
Waldir Leoncio
3fd15086af Added greedyMix support for VCF (closes #17) 2021-09-03 11:10:06 +02:00
Waldir Leoncio
448b3fe226 Updated TODOs to match issues 2021-09-03 09:14:52 +02:00
Waldir Leoncio
682555f8e3 Adapted greedyMix examples (closes #15) 2021-09-03 09:10:21 +02:00
Waldir Leoncio
db760fe899 Minor changes for clean check 2021-08-23 14:34:20 +02:00
Waldir Leoncio
cabb3318dd To-do cleanup 2021-08-23 13:46:48 +02:00
Waldir Leoncio
04a66aa2c1 Several fixes to code to pass unit tests 2021-08-23 09:10:10 +02:00
Waldir Leoncio
8956949bff Refactoring and syntax fixes 2021-06-29 10:41:23 +02:00
Waldir Leoncio
6fb06da866 Commented out non-interactive test code 2021-03-31 10:39:42 +02:00
Waldir Leoncio
3d43ed856f Added test for handleData 2021-03-31 10:31:43 +02:00
Waldir Leoncio
76861c9027 Fixed BAPS format in test unit 2021-03-30 08:23:07 +02:00
Waldir Leoncio
ae58372205 Changed dataset used for testing greedyMix 2021-03-30 08:11:25 +02:00
Waldir Leoncio
edd0cac775 Added TODO 2021-02-01 09:23:45 +01:00
Waldir Leoncio
d47b84fb55 Implemented dataframe parsing on setdiff 2021-01-15 08:59:48 +01:00
Waldir Leoncio
34cebe8604 Uncommented tests 2020-12-11 12:49:40 +01:00
Waldir Leoncio
03bec3b4b4 Improved docs 2020-11-09 07:31:33 +01:00
Waldir Leoncio
a60f6e0617 Minor changes to pass check 2020-11-09 06:57:08 +01:00
Waldir Leoncio
448373796c Added FIXME 2020-10-19 15:58:17 +02:00
Waldir Leoncio
6b1a1910e3 Improvements to setdiff 2020-10-19 15:57:15 +02:00
Waldir Leoncio
eba8705d9e Implemented basic functionality of setdiff 2020-10-19 15:32:34 +02:00
Waldir Leoncio
f886feb3a8 Translated admixture_initialization 2020-10-19 13:44:18 +02:00
Waldir Leoncio
3250349c60 Added nargin function 2020-10-19 09:50:12 +02:00
Waldir Leoncio
a31fafd5de Added test for linkage() 2020-07-31 13:59:30 +02:00
Waldir Leoncio
d5637fe428 Added unit tests for isspace 2020-07-28 10:38:28 +02:00
Waldir Leoncio
9954f12f6f Added unit tests for fix() 2020-07-14 14:10:12 +02:00
Waldir Leoncio
c2bbe701be Added tests for squeeze 2020-07-14 11:18:11 +02:00
Waldir Leoncio
bb44d0cfd4 Improved exception handling 2020-07-14 11:17:25 +02:00
Waldir Leoncio
a632a54a1d Renamed test file 2020-07-13 13:59:45 +02:00
Waldir Leoncio
32e5020d62 Translated basic Matlab function blanks() 2020-07-13 13:59:35 +02:00
Waldir Leoncio
31aeb99257 Translated cell(), added tests 2020-06-24 16:07:13 +02:00
Waldir Leoncio
6b36b5c843 Improved documentation 2020-06-24 11:48:38 +02:00
Waldir Leoncio
3105ca9995 Refactoring 2020-05-20 11:21:07 +02:00
Waldir Leoncio
8a73fe4bc1 Added capacity to handle arrays 2020-03-18 11:24:19 +01:00
Waldir Leoncio
42ada1d34a Added basic translation of "find" 2020-03-18 10:30:37 +01:00