Commit graph

531 commits

Author SHA1 Message Date
Waldir Leoncio
7aff7bbb82 Internalized all functions except greedyMix() and load_fasta() (#25) 2023-08-09 09:36:15 +02:00
Waldir Leoncio
449982a083 Merge branch 'issue-3' into develop 2023-02-16 15:30:30 +01:00
Waldir Leoncio
da0efad4a7 Increment version number to 0.0.0.9020 2023-02-16 15:30:20 +01:00
Waldir Leoncio
8bddd70781 Syntax fixes (#3) 2023-02-16 15:30:15 +01:00
Waldir Leoncio
ad09ffcf28 Merge branch 'issue-3' into develop 2023-02-10 15:25:54 +01:00
Waldir Leoncio
2b8747025c Increment version number to 0.0.0.9019 2023-02-10 15:25:38 +01:00
Waldir Leoncio
a8cae95c82 Added tests, fixed subfunctions (#3) 2023-02-10 15:11:54 +01:00
Waldir Leoncio
606078c355 Merge branch 'issue-3' into develop 2023-02-07 10:40:41 +01:00
Waldir Leoncio
1a622b4f97 Increment version number to 0.0.0.9018 2023-02-07 10:40:32 +01:00
Waldir Leoncio
5171a4f179 Added unit tests (#3) 2023-02-07 10:37:29 +01:00
Waldir Leoncio
3cfbe5bfe8 fixup! Translated testFastaData() (#3) 2023-02-07 10:37:00 +01:00
Waldir Leoncio
b5c70ac555 Merge branch 'fix-check' into develop 2023-02-01 13:47:23 +01:00
Waldir Leoncio
9ea62ffd1f Increment version number to 0.0.0.9017 2023-02-01 13:47:12 +01:00
Waldir Leoncio
45a41a9faa Fixed log2() on getPopDistancesByKL() 2023-02-01 13:46:58 +01:00
Waldir Leoncio
4ba4d4b934 Merge branch 'issue-3' into develop 2023-01-23 11:22:19 +01:00
Waldir Leoncio
0f47072599 Increment version number to 0.0.0.9016 2023-01-23 11:22:06 +01:00
Waldir Leoncio
257046dc5f Fixed synxtax of zeallot call (#3) 2023-01-23 11:22:01 +01:00
Waldir Leoncio
8ce9f3af04 Translated testFastaData() (#3) 2023-01-23 11:21:16 +01:00
Waldir Leoncio
71c8e98e55 Adding matlab2r::log2 to NAMESPACE
Checks will continue to fail until matlab2r::log2() is on CRAN. In the
meantime, one could use the function from the development version:

install_github("ocbe-uio/matlab2r")
2022-12-23 14:47:41 +01:00
Waldir Leoncio
7c7b4c5322 Merge branch 'quick-fix' into develop 2022-12-23 14:15:01 +01:00
Waldir Leoncio
28b7d979a6 Increment version number to 0.0.0.9015 2022-12-23 14:14:35 +01:00
Waldir Leoncio
3a479d1232 Making it clear which package log2() is coming from (#3) 2022-12-23 14:14:27 +01:00
Waldir Leoncio
12a33a3933 Merge branch 'issue-3' into develop 2022-12-23 13:42:48 +01:00
Waldir Leoncio
8dc8a198a3 Increment version number to 0.0.0.9014 2022-12-23 13:42:35 +01:00
Waldir Leoncio
98cde6b23e Translated dec2bitv() (#3) 2022-12-23 13:42:05 +01:00
Waldir Leoncio
ce53f1f45d Translated ind2subv() (#3) 2022-12-23 13:11:55 +01:00
Waldir Leoncio
7e1ded69e6 Merge branch 'issue-3' into develop 2022-12-23 10:46:24 +01:00
Waldir Leoncio
0acbc454d9 Increment version number to 0.0.0.9013 2022-12-23 10:46:12 +01:00
Waldir Leoncio
547bb7309c Translated minimum_spanning_tree() (#3) 2022-12-23 10:45:50 +01:00
Waldir Leoncio
9173b8bf70 Merge branch 'fix-ci' into develop 2022-12-23 10:00:08 +01:00
Waldir Leoncio
de17e3fc31 Increment version number to 0.0.0.9012 2022-12-23 09:37:45 +01:00
Waldir Leoncio
bc3e0f0a0b Updated r-lib/actions versions 2022-12-23 09:37:15 +01:00
Waldir Leoncio
ffca7ea3c4 Merge branch 'issue-3' into develop 2022-12-22 15:06:13 +01:00
Waldir Leoncio
a3e51c1577 Added more TODOs to unit tests 2022-12-22 15:06:04 +01:00
Waldir Leoncio
0048a4e5fd Added placeholder for ind2subv() 2022-12-22 15:06:04 +01:00
Waldir Leoncio
b6afea85e1 Translated myisvector() 2022-12-22 15:06:04 +01:00
Waldir Leoncio
6f8e1a51a2 Translated mysize() 2022-12-22 15:06:04 +01:00
Waldir Leoncio
6a81eb9d2c Translated argmin() 2022-12-22 15:06:04 +01:00
Waldir Leoncio
c69c0639ae Translated elim_order() 2022-12-22 15:06:04 +01:00
Waldir Leoncio
aff5b3de15 Added more functions to translate 2022-12-22 15:06:04 +01:00
Waldir Leoncio
ac1e73c6fa Translated cliques_to_jtree() 2022-12-22 15:06:04 +01:00
Waldir Leoncio
76d31e593a Translated setdiag() 2022-12-22 13:43:36 +01:00
Waldir Leoncio
f2f59ba7f8 Translated myunion() 2022-12-22 13:36:07 +01:00
Waldir Leoncio
a757a4435c Translated mysubset() 2022-12-22 13:31:41 +01:00
Waldir Leoncio
73438af7bb Removed translating TODOs
Replaced with built-in TODO list in Issue #3's body
2022-12-22 13:29:54 +01:00
Waldir Leoncio
bc5bb61f52 Added placeholder for mysubset() 2022-12-22 13:18:54 +01:00
Waldir Leoncio
d4c11a89af Translated neighbors() 2022-12-22 13:12:44 +01:00
Waldir Leoncio
eabfd2efea Translated triangulate() 2022-12-22 11:57:32 +01:00
Waldir Leoncio
17019a9c94 Added commented-out original code to still-empty functions 2022-12-22 11:57:18 +01:00
Waldir Leoncio
e60e40b21c Translated myintersect() 2022-12-22 10:41:26 +01:00