Waldir Leoncio
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b7282d67df
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Adapted tests to FASTA on greedyMix() (#24)
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2024-08-19 13:32:05 +02:00 |
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Waldir Leoncio
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43886d649f
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Removed baps file pointing to fasta
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2024-08-19 13:29:18 +02:00 |
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Waldir Leoncio
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95ff2378b1
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Added unit tests (#24)
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2024-07-02 16:39:48 +02:00 |
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Waldir Leoncio
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e4af251307
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Fixed tests (#24)
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2024-07-02 11:23:22 +02:00 |
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Waldir Leoncio
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2a815f15cd
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Added (commented) test for BAPS data (#24)
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2024-04-11 09:47:30 +02:00 |
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Waldir Leoncio
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99f28ba215
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Renamed global environment, fixed assignments (#24)
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2024-04-11 09:47:29 +02:00 |
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Waldir Leoncio
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98b5e7a154
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Added/renamed BAPS example data (#24)
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2024-04-10 16:06:56 +02:00 |
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Waldir Leoncio
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6209bb33fa
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Fails for FAST input to greedyMix() (#24)
This is a desirable feature, but was not implemented in the original BAPS, so better leave it out until the original planned features is working.
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2024-04-08 13:14:54 +02:00 |
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Waldir Leoncio
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e3f14ee97d
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Fixed object name in test
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2023-09-11 13:53:42 +02:00 |
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Waldir Leoncio
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ce954bf801
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Adjusted unit tests for #25
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2023-09-11 13:14:23 +02:00 |
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Waldir Leoncio
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a51816d5c0
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Fixed test text (#25)
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2023-08-11 08:17:56 +02:00 |
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Waldir Leoncio
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687a6fb671
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Moved used datasets to /isnt/extdata (#25)
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2023-08-09 10:54:48 +02:00 |
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Waldir Leoncio
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8bddd70781
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Syntax fixes (#3)
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2023-02-16 15:30:15 +01:00 |
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Waldir Leoncio
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a8cae95c82
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Added tests, fixed subfunctions (#3)
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2023-02-10 15:11:54 +01:00 |
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Waldir Leoncio
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5171a4f179
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Added unit tests (#3)
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2023-02-07 10:37:29 +01:00 |
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Waldir Leoncio
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a3e51c1577
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Added more TODOs to unit tests
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2022-12-22 15:06:04 +01:00 |
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Waldir Leoncio
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aff5b3de15
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Added more functions to translate
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2022-12-22 15:06:04 +01:00 |
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Waldir Leoncio
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bc5bb61f52
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Added placeholder for mysubset()
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2022-12-22 13:18:54 +01:00 |
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Waldir Leoncio
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17019a9c94
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Added commented-out original code to still-empty functions
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2022-12-22 11:57:18 +01:00 |
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Waldir Leoncio
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35bb795dbe
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Added (empty) unit test for lakseKlitik()
Helps remember to add tests for functions
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2022-12-22 10:01:26 +01:00 |
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Waldir Leoncio
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a354202bc0
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Added unit tests (#3)
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2022-11-16 11:56:30 +01:00 |
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Waldir Leoncio
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1667682c5e
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Refactored laskeMuutokset4() as an R6 method
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2022-08-25 12:54:55 +02:00 |
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Waldir Leoncio
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835ac7e6b9
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Fixed several linting issues
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2022-07-28 15:47:36 +02:00 |
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Waldir Leoncio
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86a5dda6d6
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Translated mysetdiff() (#3)
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2022-07-28 14:43:04 +02:00 |
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Waldir Leoncio
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84e0eb61d8
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Translated computeDiffInCliqCounts() (#3)
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2022-07-28 14:23:35 +02:00 |
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Waldir Leoncio
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31ab81a215
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Translated computeCounts() (#3)
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2022-07-28 11:16:59 +02:00 |
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Waldir Leoncio
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9b1cf810a3
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Fixing test expectation
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2022-04-13 09:12:59 +02:00 |
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Waldir Leoncio
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f81a078365
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Reorganizing tests
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2022-04-13 09:12:59 +02:00 |
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Waldir Leoncio
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40f2b3f07a
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Added test unit for handlePopData()
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2022-04-13 09:12:59 +02:00 |
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Waldir Leoncio
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58ee8ccb92
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Added unit test
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2022-04-12 14:14:51 +02:00 |
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Waldir Leoncio
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c9c310d1fa
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Translated getPopDistancesByKL (#2)
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2022-04-12 14:14:12 +02:00 |
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Waldir Leoncio
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98cff11128
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Added unit test file for greedyPopMix functions (#2)
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2022-02-08 11:23:22 +01:00 |
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Waldir Leoncio
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9fb8c08f72
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Removed functions moved to matlab2r (#21)
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2022-01-27 11:40:16 +01:00 |
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Waldir Leoncio
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c5cf0edd1d
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Removed unnecessary concantenations
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2021-11-10 14:55:11 +01:00 |
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Waldir Leoncio
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fca9caa731
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Restyled files
Ran through styler::style_dir() in the R and tests directories in preparation for #23.
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2021-11-10 14:25:50 +01:00 |
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Waldir Leoncio
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d105c40d39
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Refactoring
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2021-09-03 12:50:40 +02:00 |
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Waldir Leoncio
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0cfd13b006
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Added SAM/BAM support (closes #18)
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2021-09-03 12:50:28 +02:00 |
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Waldir Leoncio
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3fd15086af
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Added greedyMix support for VCF (closes #17)
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2021-09-03 11:10:06 +02:00 |
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Waldir Leoncio
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448b3fe226
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Updated TODOs to match issues
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2021-09-03 09:14:52 +02:00 |
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Waldir Leoncio
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682555f8e3
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Adapted greedyMix examples (closes #15)
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2021-09-03 09:10:21 +02:00 |
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Waldir Leoncio
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db760fe899
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Minor changes for clean check
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2021-08-23 14:34:20 +02:00 |
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Waldir Leoncio
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cabb3318dd
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To-do cleanup
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2021-08-23 13:46:48 +02:00 |
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Waldir Leoncio
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04a66aa2c1
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Several fixes to code to pass unit tests
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2021-08-23 09:10:10 +02:00 |
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Waldir Leoncio
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8956949bff
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Refactoring and syntax fixes
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2021-06-29 10:41:23 +02:00 |
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Waldir Leoncio
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6fb06da866
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Commented out non-interactive test code
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2021-03-31 10:39:42 +02:00 |
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Waldir Leoncio
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3d43ed856f
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Added test for handleData
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2021-03-31 10:31:43 +02:00 |
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Waldir Leoncio
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76861c9027
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Fixed BAPS format in test unit
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2021-03-30 08:23:07 +02:00 |
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Waldir Leoncio
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ae58372205
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Changed dataset used for testing greedyMix
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2021-03-30 08:11:25 +02:00 |
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Waldir Leoncio
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edd0cac775
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Added TODO
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2021-02-01 09:23:45 +01:00 |
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Waldir Leoncio
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d47b84fb55
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Implemented dataframe parsing on setdiff
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2021-01-15 08:59:48 +01:00 |
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