Commit graph

104 commits

Author SHA1 Message Date
Waldir Leoncio
0cfd13b006 Added SAM/BAM support (closes #18) 2021-09-03 12:50:28 +02:00
Waldir Leoncio
8b44947ecb Fixed dependencies 2021-09-03 11:17:00 +02:00
Waldir Leoncio
12edd330b9 Improved load_fasta validation 2021-09-03 09:09:09 +02:00
Waldir Leoncio
a296f9f8fb greedyMix changed to channel data load (close #16) 2021-09-03 08:50:23 +02:00
Waldir Leoncio
db760fe899 Minor changes for clean check 2021-08-23 14:34:20 +02:00
Waldir Leoncio
04a66aa2c1 Several fixes to code to pass unit tests 2021-08-23 09:10:10 +02:00
Waldir Leoncio
6a124ac3ce Improved documentation of load_fasta (#16) 2021-08-23 06:47:08 +02:00
Waldir Leoncio
cafd194880 Replaced greedyMix() with a stop message 2021-08-23 06:40:49 +02:00
Waldir Leoncio
67170d1c7b Refactoring 2021-06-29 10:37:42 +02:00
Waldir Leoncio
39145ee865 Updated docs 2021-03-31 10:39:15 +02:00
Waldir Leoncio
3b423cdb09 Updated docs 2021-01-15 10:23:22 +01:00
Waldir Leoncio
8989696dd1 Exported functions 2020-12-11 12:32:41 +01:00
Waldir Leoncio
19e212b137 Removed global variables from argument lists 2020-11-19 14:48:33 +01:00
Waldir Leoncio
28d0cb614b Updated docs 2020-11-19 13:33:21 +01:00
Waldir Leoncio
a3fcaf17dd Translated rand_disc 2020-11-19 12:15:16 +01:00
Waldir Leoncio
0257e5fbfb Reorganization and improvements on matlab2r 2020-11-19 10:48:33 +01:00
Waldir Leoncio
46a9249e5a Fixed syntax 2020-11-19 07:53:36 +01:00
Waldir Leoncio
97af90d05d Minor improvements to translator function 2020-11-19 07:49:30 +01:00
Waldir Leoncio
03bec3b4b4 Improved docs 2020-11-09 07:31:33 +01:00
Waldir Leoncio
9ae09f543f Refactoring 2020-11-09 06:26:53 +01:00
Waldir Leoncio
637df694bb Updated docs 2020-10-19 15:57:30 +02:00
Waldir Leoncio
f886feb3a8 Translated admixture_initialization 2020-10-19 13:44:18 +02:00
Waldir Leoncio
3250349c60 Added nargin function 2020-10-19 09:50:12 +02:00
Waldir Leoncio
d57be6a8f3 Updated documentation 2020-07-31 14:05:55 +02:00
Waldir Leoncio
372500d750 Reimplemented fgetl 2020-07-31 09:26:57 +02:00
Waldir Leoncio
001d7a7c6d Added base function isspace() 2020-07-28 10:31:06 +02:00
Waldir Leoncio
7a68fbd585 Several fixes for cleaner check 2020-07-14 14:52:31 +02:00
Waldir Leoncio
7a7945f6bb Translated linkage() 2020-07-14 14:33:20 +02:00
Waldir Leoncio
107d07bcf2 Translated fix from base MATLAB 2020-07-14 14:09:57 +02:00
Waldir Leoncio
aa9f1c4ef6 Translated initPopNames 2020-07-14 13:37:56 +02:00
Waldir Leoncio
e265f738e8 Translated handleData 2020-07-14 12:25:30 +02:00
Waldir Leoncio
a27f303f4a Optimized squeeze() 2020-07-14 11:18:01 +02:00
Waldir Leoncio
e89c51de57 Translated writeMixtureInfo() 2020-07-14 11:16:03 +02:00
Waldir Leoncio
9c5beeda43 Translated squeeze 2020-07-14 09:40:46 +02:00
Waldir Leoncio
6389a4104c Translated logml2String 2020-07-13 15:13:36 +02:00
Waldir Leoncio
32e5020d62 Translated basic Matlab function blanks() 2020-07-13 13:59:35 +02:00
Waldir Leoncio
cc9704489c Translated takeLine() 2020-07-13 13:23:31 +02:00
Waldir Leoncio
0190910244 Minor adjustments for clean check 2020-06-24 16:49:31 +02:00
Waldir Leoncio
d074de07f4 Translated addAlleles 2020-06-24 16:47:39 +02:00
Waldir Leoncio
ec650cc6f6 Translated selvitaDigitFormat 2020-06-24 16:22:25 +02:00
Waldir Leoncio
fc1b947ca9 Translated lueNimi 2020-06-24 16:21:30 +02:00
Waldir Leoncio
31aeb99257 Translated cell(), added tests 2020-06-24 16:07:13 +02:00
Waldir Leoncio
862a91febc Added bare-bones lueGenePopData 2020-06-24 15:16:13 +02:00
Waldir Leoncio
0e7e2086c6 Updated documentation 2020-06-24 12:12:10 +02:00
Waldir Leoncio
eb14afae8a Translated rivinSisaltamienMjonojenLkm 2020-06-24 12:11:54 +02:00
Waldir Leoncio
6b36b5c843 Improved documentation 2020-06-24 11:48:38 +02:00
Waldir Leoncio
8a4b2d8fc3 Added testaaGenePopData function 2020-06-08 15:41:52 +02:00
Waldir Leoncio
3fcd4affcb Added arguments to limit user interaction 2020-06-08 13:42:36 +02:00
Waldir Leoncio
3962c8c0e8 Added listing of files 2020-05-20 13:09:11 +02:00
Waldir Leoncio
ee57a98589 Allowing for empty title 2020-05-20 13:08:57 +02:00