Commit graph

612 commits

Author SHA1 Message Date
Waldir Leoncio
c05a500d5f Translated laskeVarmuus (#3) 2022-08-25 13:03:36 +02:00
Waldir Leoncio
1667682c5e Refactored laskeMuutokset4() as an R6 method 2022-08-25 12:54:55 +02:00
Waldir Leoncio
06dd1a74ee Merge branch 'fix-check' into develop 2022-08-17 14:20:42 +02:00
Waldir Leoncio
dab9845338 Skipping test against R-devel in certain months
According to <https://contributions.bioconductor.org/use-devel.html>,
Bioconductor relies on R-release during the April-October release cycle,
which makes it challenging to do a CI check on R-devel. So we skip the
check against R-devel during these months (until a better solution comes
around).
2022-08-17 14:19:31 +02:00
Waldir Leoncio
c88c282d5c Split release and devel BiocManager installation 2022-08-17 14:19:31 +02:00
Waldir Leoncio
ad4bcc6696 Merge branch 'fix-linter' into develop 2022-07-28 15:48:20 +02:00
Waldir Leoncio
835ac7e6b9 Fixed several linting issues 2022-07-28 15:47:36 +02:00
Waldir Leoncio
66d0f0c730 Fixed CI linter YAML 2022-07-28 14:54:35 +02:00
Waldir Leoncio
461975c823 Merge branch 'issue-3' into develop 2022-07-28 14:51:37 +02:00
Waldir Leoncio
86a5dda6d6 Translated mysetdiff() (#3) 2022-07-28 14:43:04 +02:00
Waldir Leoncio
84e0eb61d8 Translated computeDiffInCliqCounts() (#3) 2022-07-28 14:23:35 +02:00
Waldir Leoncio
eef819a9c3 Merge branch 'issue-3' into develop 2022-07-28 14:15:12 +02:00
Waldir Leoncio
31ab81a215 Translated computeCounts() (#3) 2022-07-28 11:16:59 +02:00
Waldir Leoncio
40854fe253 Increment version number to 0.0.0.9009 2022-07-28 10:18:11 +02:00
Waldir Leoncio
ea0190b874 Syntax fixes, added documentation 2022-07-19 14:34:08 +02:00
Waldir Leoncio
78aae03cb1 Merge branch 'issue-2' into develop (#2) 2022-07-19 13:47:25 +02:00
Waldir Leoncio
8f3193e59b Translated greedyPopMix() (#2) 2022-07-19 13:47:15 +02:00
Waldir Leoncio
87f4ffb8d4 Translated waitALittle() 2022-07-19 13:47:15 +02:00
Waldir Leoncio
4e8c3021e0 Added diff translation of greedyPopMix() (#2) 2022-07-19 13:47:12 +02:00
Waldir Leoncio
fccd8b406b Merge branch 'issue-2' into develop 2022-05-19 15:08:03 +02:00
Waldir Leoncio
f0d4858149 Translated writeMixtureInfoPop() (#2) 2022-05-19 15:07:53 +02:00
Waldir Leoncio
26e2a48c97 Moved original MATLAB code to package 2022-05-13 13:38:35 +02:00
Waldir Leoncio
3d3b8cb8c6 Increment version number to 0.0.0.9008 2022-05-13 12:46:47 +02:00
Waldir Leoncio
5be7fb6906 Merge branch 'issue-2' into develop 2022-05-13 12:44:43 +02:00
Waldir Leoncio
a469240f81 Replaced some syntax
Replaced translated code with equivalent code from `lueGenePopData()`
2022-05-13 12:41:19 +02:00
Waldir Leoncio
1cc0fba114 Added function documentation 2022-05-13 12:40:34 +02:00
Waldir Leoncio
fff8574b82 Translated lueGenePopDataPop() (#2) 2022-05-13 11:22:31 +02:00
Waldir Leoncio
82b7515e51 Increment version number to 0.0.0.9007 2022-05-13 11:22:31 +02:00
Waldir Leoncio
55b3362c58 Fixed minor check notes 2022-05-13 11:22:18 +02:00
Waldir Leoncio
2ac99025b4 Merge issue-2-translate-greedyPopMix into develop 2022-04-13 09:17:46 +02:00
Waldir Leoncio
ae57dd4536 Updated docs 2022-04-13 09:17:40 +02:00
Waldir Leoncio
c0f4072525 Bumped build version 2022-04-13 09:13:25 +02:00
Waldir Leoncio
9b1cf810a3 Fixing test expectation 2022-04-13 09:12:59 +02:00
Waldir Leoncio
f81a078365 Reorganizing tests 2022-04-13 09:12:59 +02:00
Waldir Leoncio
40f2b3f07a Added test unit for handlePopData() 2022-04-13 09:12:59 +02:00
Waldir Leoncio
03db7f4124 Translated handlePopData (#2) 2022-04-13 09:12:59 +02:00
Waldir Leoncio
9224c44cb6 Merge issue-2-translate-greedyPopMix into develop 2022-04-12 14:15:09 +02:00
Waldir Leoncio
58ee8ccb92 Added unit test 2022-04-12 14:14:51 +02:00
Waldir Leoncio
c9c310d1fa Translated getPopDistancesByKL (#2) 2022-04-12 14:14:12 +02:00
Waldir Leoncio
d71bd0567a Removed translated code 2022-02-08 11:27:22 +01:00
Waldir Leoncio
e9e858c667 Merge 2-translate-greedyPopMix into develop 2022-02-08 11:23:29 +01:00
Waldir Leoncio
98cff11128 Added unit test file for greedyPopMix functions (#2) 2022-02-08 11:23:22 +01:00
Waldir Leoncio
1462f6167f Translated findOutRowsFromInd (#2)
Importing one more function from matlab2r
2022-02-08 11:23:14 +01:00
Waldir Leoncio
4a7cf802e8 Removed translated function from MATLAB script 2022-02-03 12:58:54 +01:00
Waldir Leoncio
1baa99540c Merge 2-translate-greedyPopMix into develop 2022-02-03 12:57:01 +01:00
Waldir Leoncio
8860f0159c Translated fiksaaPartitioYksiloTasolle() (#2) 2022-02-03 12:56:20 +01:00
Waldir Leoncio
cf77908604 Merge branch 'split-ci' into develop 2022-02-03 11:09:10 +01:00
Waldir Leoncio
857083a38f Moved lint and coverage CI to their own YML 2022-02-03 11:00:46 +01:00
Waldir Leoncio
9f36a3046b Renamed monolithic YML 2022-02-03 10:56:52 +01:00
Waldir Leoncio
e0b2960f1a Merge branch 'import-matlab2r' into develop 2022-02-03 10:49:59 +01:00