Waldir Leoncio
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0cfd13b006
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Added SAM/BAM support (closes #18)
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2021-09-03 12:50:28 +02:00 |
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Waldir Leoncio
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15f2cbcf08
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Replaced SAM example
Current one from https://genome.sph.umich.edu/wiki/SAM. Readable by the "VladaMilch/pdProbeRemap" package.
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2021-09-03 12:10:05 +02:00 |
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Waldir Leoncio
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8b44947ecb
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Fixed dependencies
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2021-09-03 11:17:00 +02:00 |
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Waldir Leoncio
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c06943d1b4
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Closed TODO
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2021-09-03 11:11:55 +02:00 |
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Waldir Leoncio
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3fd15086af
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Added greedyMix support for VCF (closes #17)
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2021-09-03 11:10:06 +02:00 |
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Waldir Leoncio
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448b3fe226
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Updated TODOs to match issues
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2021-09-03 09:14:52 +02:00 |
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Waldir Leoncio
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a296f9f8fb
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greedyMix changed to channel data load (close #16)
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2021-09-03 08:50:23 +02:00 |
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Waldir Leoncio
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cafd194880
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Replaced greedyMix() with a stop message
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2021-08-23 06:40:49 +02:00 |
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Waldir Leoncio
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8956949bff
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Refactoring and syntax fixes
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2021-06-29 10:41:23 +02:00 |
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Waldir Leoncio
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4520fd30fb
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Fixed syntax
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2021-05-20 09:18:05 +02:00 |
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Waldir Leoncio
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aec2f40c2c
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Syntax fixes
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2021-03-31 10:31:14 +02:00 |
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Waldir Leoncio
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d16de2ba7d
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Uncommented translated functions
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2021-03-30 08:34:41 +02:00 |
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Waldir Leoncio
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ef540baf7e
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Reformatting BAPS input
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2021-03-30 08:34:31 +02:00 |
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Waldir Leoncio
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c7720f33b4
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Fixed output formatting
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2021-03-30 08:23:37 +02:00 |
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Waldir Leoncio
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f70277cd6a
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Fixed delimiter for BAPS-formatted file
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2021-03-30 08:22:24 +02:00 |
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Waldir Leoncio
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68ad663ce1
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Fixed syntax
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2021-01-15 11:46:53 +01:00 |
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Waldir Leoncio
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0fec3ab096
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Cleanup of commented-out code
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2020-11-19 13:31:20 +01:00 |
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Waldir Leoncio
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a3fcaf17dd
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Translated rand_disc
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2020-11-19 12:15:16 +01:00 |
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Waldir Leoncio
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a7291a9e79
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Refactoring
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2020-11-19 08:45:50 +01:00 |
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Waldir Leoncio
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f886feb3a8
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Translated admixture_initialization
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2020-10-19 13:44:18 +02:00 |
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Waldir Leoncio
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d57be6a8f3
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Updated documentation
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2020-07-31 14:05:55 +02:00 |
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Waldir Leoncio
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f89a6e9fa3
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Fixed syntax
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2020-07-31 14:00:29 +02:00 |
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Waldir Leoncio
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56d8a5c081
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Unraveled internal functions of greedyMix
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2020-07-28 15:51:28 +02:00 |
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Waldir Leoncio
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ba1573ad59
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Fixed behavior of testaaGenePopData
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2020-07-28 11:45:28 +02:00 |
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Waldir Leoncio
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743c39afba
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Translated clearGlobalVars()
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2020-07-14 15:59:16 +02:00 |
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Waldir Leoncio
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1b0319a88c
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Translated initialCounts()
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2020-07-14 15:47:01 +02:00 |
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Waldir Leoncio
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dfc9659180
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translated laskeLoggis()
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2020-07-14 15:33:20 +02:00 |
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Waldir Leoncio
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a40b07c69d
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Translated omaRound()
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2020-07-14 15:16:10 +02:00 |
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Waldir Leoncio
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7a68fbd585
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Several fixes for cleaner check
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2020-07-14 14:52:31 +02:00 |
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Waldir Leoncio
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854c120916
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Documentation update
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2020-07-14 14:35:48 +02:00 |
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Waldir Leoncio
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aa9f1c4ef6
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Translated initPopNames
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2020-07-14 13:37:56 +02:00 |
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Waldir Leoncio
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e265f738e8
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Translated handleData
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2020-07-14 12:25:30 +02:00 |
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Waldir Leoncio
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a78a9c8a7d
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Code cleanup
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2020-07-14 11:18:20 +02:00 |
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Waldir Leoncio
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cc9704489c
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Translated takeLine()
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2020-07-13 13:23:31 +02:00 |
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Waldir Leoncio
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d074de07f4
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Translated addAlleles
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2020-06-24 16:47:39 +02:00 |
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Waldir Leoncio
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a671895caa
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Removed commented-out Matlab code
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2020-06-24 16:24:10 +02:00 |
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Waldir Leoncio
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862a91febc
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Added bare-bones lueGenePopData
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2020-06-24 15:16:13 +02:00 |
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Waldir Leoncio
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b2d1b830cd
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Improved documentation
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2020-06-24 12:37:38 +02:00 |
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Waldir Leoncio
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d2fb3bf90a
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Unwrapped translated function
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2020-06-24 12:37:24 +02:00 |
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Waldir Leoncio
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0e7e2086c6
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Updated documentation
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2020-06-24 12:12:10 +02:00 |
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Waldir Leoncio
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156b0c58b3
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Translated testaaPop
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2020-06-24 11:49:29 +02:00 |
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Waldir Leoncio
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eebe7a7635
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Enabled testaaOnkoKunnollinenBapsData
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2020-06-24 11:49:16 +02:00 |
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Waldir Leoncio
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6b36b5c843
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Improved documentation
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2020-06-24 11:48:38 +02:00 |
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Waldir Leoncio
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4b2cba59bd
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Added function
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2020-06-24 11:14:13 +02:00 |
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Waldir Leoncio
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8a4b2d8fc3
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Added testaaGenePopData function
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2020-06-08 15:41:52 +02:00 |
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Waldir Leoncio
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3fcd4affcb
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Added arguments to limit user interaction
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2020-06-08 13:42:36 +02:00 |
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Waldir Leoncio
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b622375062
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Added bare-bones greedyMix
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2020-05-20 15:34:40 +02:00 |
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Waldir Leoncio
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0d1396b1e5
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Added greedyMix.R (commented out)
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2020-05-20 07:34:36 +02:00 |
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